Personal tools

Difference between revisions of "TSS:Mm 100945.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000005115=
 
|OTTMUSG00000005115=
|all_trans=ENSMUST00000147762.8:4 ENSMUST00000124818.2:17 ENSMUST00000134527.2:20 NR_045893:23 AK160548:23 KY467466:37 AK032971:39
+
|all_trans=MGI:3650059
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 23: Line 23:
 
|nearest_refseq=NR_045893
 
|nearest_refseq=NR_045893
 
|nearest_unigene=Mm.459507
 
|nearest_unigene=Mm.459507
|num_trans=7
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=6528782
 
|start=6528782

Latest revision as of 10:49, 26 July 2021

Basic information about the TSS


TSS ID:mm_100945.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6528782
End:6528807
Strand:-
TSS Score:1
Start of the center position in the TSS region:6528794
End of the center position in the TSS region:6528795



Gene and protein annotation


Transcript_name:ENSMUST00000147762.8
Distance:4
GeneID:
HGNC/MGI_ID:MGI:3650059
UniProt_ID:
Gene_name:small nucleolar RNA host gene 15
Gene_symbol:Snhg15
Gene_synonyms:Gm11974 SAM
Gene_source:MGI:3650059



Transcript annotation


Transcript_name:ENSMUST00000147762.8
Distance:4
Num_trans:
All_trans:MGI:3650059



TATA-Box annotation


Distance to TSS:-35
Nearest PromoterID:NR_045893
Entrez ID:100041286
Nearest Unigene:Mm.459507
Nearest Refseq:NR_045893
Nearest Ensembl:ENSMUSG00000085156
Gene Name:small nucleolar RNA host gene 15
Gene Alias:Gm11974
Gene Description:small nucleolar RNA host gene 15
Gene Type:ncRNA
CpG%:0.115
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):