Difference between revisions of "TSS:Mm 100956.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AA120735= |
| + | |AA408001= | ||
| + | |AI527316= | ||
| + | |Cpr2= | ||
| + | |R74877= | ||
| + | |Tb-12= | ||
| + | |all_trans=MGI:1100868 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
|end=6626072 | |end=6626072 | ||
| + | |end_of_center_position=6626052 | ||
|entrez_id=21379 | |entrez_id=21379 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=2310042P22Rik | + | |gene_alias=2310042P22Rik{{!}}AA120735{{!}}AA408001{{!}}AI527316{{!}}Cpr2{{!}}R74877{{!}}Tb-12 |
|gene_description=transforming growth factor beta regulated gene 4 | |gene_description=transforming growth factor beta regulated gene 4 | ||
|gene_id=21379 | |gene_id=21379 | ||
| Line 17: | Line 24: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1100868 | |hgnc_mgi_id=MGI:1100868 | ||
| + | |mKIAA0948= | ||
|nearest_ensembl=ENSMUSG00000000384 | |nearest_ensembl=ENSMUSG00000000384 | ||
|nearest_promoter_id=NM_001130457 | |nearest_promoter_id=NM_001130457 | ||
|nearest_refseq=NM_134011 | |nearest_refseq=NM_134011 | ||
|nearest_unigene=Mm.247761 | |nearest_unigene=Mm.247761 | ||
| − | |num_trans= | + | |num_trans=21379 |
|species=mouse | |species=mouse | ||
|start=6626030 | |start=6626030 | ||
| + | |start_of_center_position=6626051 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000156969.7 ENSMUST00000189268.6 ENSMUST00000000394.13 ENSMUST00000150697.7 ENSMUST00000136682.7 | + | |transcript_name=ENSMUST00000156969.7 ENSMUST00000189268.6 ENSMUST00000000394.13 ENSMUST00000150697.7 ENSMUST00000136682.7 BC031910 AK168088 AK144813 AK028966 AK166760 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100956.1 | |tss_id=mm_100956.1 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6626051 |
|---|---|
| End of the center position in the TSS region: | 6626052 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000156969.7 ENSMUST00000189268.6 ENSMUST00000000394.13 ENSMUST00000150697.7 ENSMUST00000136682.7 BC031910 AK168088 AK144813 AK028966 AK166760 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21379 |
| All_trans: | MGI:1100868 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001130457 |
| Entrez ID: | 21379 |
| Nearest Unigene: | Mm.247761 |
| Nearest Refseq: | NM_134011 |
| Nearest Ensembl: | ENSMUSG00000000384 |
| Gene Name: | transforming growth factor beta regulated gene 4 |
| Gene Alias: | 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12 |
| Gene Description: | transforming growth factor beta regulated gene 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
