Difference between revisions of "TSS:Mm 100972.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000139769.1:0 NR_046025:0 uc007hze.1:0 AK076664:0 |chr=chr11 |cpg_percent=0.02 |distance=0 |distance_to_tss=-3 |end=6720063 |entrez_id=626419 |...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3650697 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=6720063 | |end=6720063 | ||
| + | |end_of_center_position=6720040 | ||
|entrez_id=626419 | |entrez_id=626419 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11981 | |gene_description=predicted gene 11981 | ||
|gene_id=626419 | |gene_id=626419 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_046025 | |nearest_refseq=NR_046025 | ||
|nearest_unigene=Mm.390334 | |nearest_unigene=Mm.390334 | ||
| − | |num_trans= | + | |num_trans=626419 |
|species=mouse | |species=mouse | ||
|start=6720016 | |start=6720016 | ||
| + | |start_of_center_position=6720039 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000139769 | + | |transcript_name=ENSMUST00000139769.1 AK076664 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100972.1 | |tss_id=mm_100972.1 | ||
Latest revision as of 10:50, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6720039 |
|---|---|
| End of the center position in the TSS region: | 6720040 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000139769.1 AK076664 |
|---|---|
| Distance: | 0 |
| Num_trans: | 626419 |
| All_trans: | MGI:3650697 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NR_046025 |
| Entrez ID: | 626419 |
| Nearest Unigene: | Mm.390334 |
| Nearest Refseq: | NR_046025 |
| Nearest Ensembl: | ENSMUSG00000086808 |
| Gene Name: | predicted gene 11981 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11981 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
