Difference between revisions of "TSS:Mm 10104.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Armetl1= | |Armetl1= | ||
| − | |all_trans= | + | |all_trans=MGI:3606576 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 10: | Line 10: | ||
|entrez_id=227526 | |entrez_id=227526 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=9330140G23 | + | |gene_alias=9330140G23{{!}}Armetl1 |
|gene_description=cerebral dopamine neurotrophic factor | |gene_description=cerebral dopamine neurotrophic factor | ||
|gene_id=227526 | |gene_id=227526 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_177647 | |nearest_refseq=NM_177647 | ||
|nearest_unigene=Mm.211455 | |nearest_unigene=Mm.211455 | ||
| − | |num_trans= | + | |num_trans=227526 |
|species=mouse | |species=mouse | ||
|start=3513035 | |start=3513035 | ||
|start_of_center_position=3513054 | |start_of_center_position=3513054 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000036350.2 | + | |transcript_name=ENSMUST00000036350.2 AK034009 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10104.1 | |tss_id=mm_10104.1 | ||
Latest revision as of 10:51, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3513054 |
|---|---|
| End of the center position in the TSS region: | 3513055 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000036350.2 AK034009 |
|---|---|
| Distance: | 0 |
| Num_trans: | 227526 |
| All_trans: | MGI:3606576 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_177647 |
| Entrez ID: | 227526 |
| Nearest Unigene: | Mm.211455 |
| Nearest Refseq: | NM_177647 |
| Nearest Ensembl: | ENSMUSG00000039496 |
| Gene Name: | cerebral dopamine neurotrophic factor |
| Gene Alias: | 9330140G23|Armetl1 |
| Gene Description: | cerebral dopamine neurotrophic factor |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
