Difference between revisions of "TSS:Mm 101045.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|TEM6= | |TEM6= | ||
|Tens1= | |Tens1= | ||
| + | |all_trans=MGI:2443012 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=-230 |
|distance_to_tss=39896 | |distance_to_tss=39896 | ||
|end=8624657 | |end=8624657 | ||
| Line 11: | Line 12: | ||
|entrez_id=319939 | |entrez_id=319939 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=BC023928 | + | |gene_alias=BC023928{{!}}F830010I22Rik{{!}}TEM6{{!}}Tens1 |
|gene_description=tensin 3 | |gene_description=tensin 3 | ||
| − | |gene_name=Tns3 | + | |gene_id=319939 |
| + | |gene_name=tensin 3 | ||
| + | |gene_source=MGI:2443012 | ||
| + | |gene_symbol=Tns3 | ||
| + | |gene_synonyms=F830010I22Rik TEM6 Tens1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:2443012 | ||
|nearest_ensembl=ENSMUSG00000020422 | |nearest_ensembl=ENSMUSG00000020422 | ||
|nearest_promoter_id=NM_001083587 | |nearest_promoter_id=NM_001083587 | ||
|nearest_refseq=NM_001083587 | |nearest_refseq=NM_001083587 | ||
|nearest_unigene=Mm.337820 | |nearest_unigene=Mm.337820 | ||
| − | |num_trans= | + | |num_trans=319939 |
|species=mouse | |species=mouse | ||
|start=8624620 | |start=8624620 | ||
|start_of_center_position=8624638 | |start_of_center_position=8624638 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000239091.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_101045.1 | |tss_id=mm_101045.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A5F8MP98 | ||
}} | }} | ||
Latest revision as of 10:51, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8624638 |
|---|---|
| End of the center position in the TSS region: | 8624639 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000239091.1 |
|---|---|
| Distance: | -230 |
| Num_trans: | 319939 |
| All_trans: | MGI:2443012 |
TATA-Box annotation
| Distance to TSS: | 39896 |
|---|---|
| Nearest PromoterID: | NM_001083587 |
| Entrez ID: | 319939 |
| Nearest Unigene: | Mm.337820 |
| Nearest Refseq: | NM_001083587 |
| Nearest Ensembl: | ENSMUSG00000020422 |
| Gene Name: | tensin 3 |
| Gene Alias: | BC023928|F830010I22Rik|TEM6|Tens1 |
| Gene Description: | tensin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
