Personal tools

Difference between revisions of "TSS:Mm 101062.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576:-480 AK052771:-480
+
|all_trans=MGI:3041199
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 22: Line 22:
 
|nearest_refseq=NM_001037928
 
|nearest_refseq=NM_001037928
 
|nearest_unigene=Mm.369429
 
|nearest_unigene=Mm.369429
|num_trans=5
+
|num_trans=194974
 
|species=mouse
 
|species=mouse
 
|start=9048493
 
|start=9048493

Latest revision as of 10:52, 26 July 2021

Basic information about the TSS


TSS ID:mm_101062.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:9048493
End:9048511
Strand:-
TSS Score:1
Start of the center position in the TSS region:9048502
End of the center position in the TSS region:9048503



Gene and protein annotation


Transcript_name:BC109334
Distance:-394
GeneID:194974
HGNC/MGI_ID:MGI:3041199
UniProt_ID:
Gene_name:Sad1 and UNC84 domain containing 3
Gene_symbol:Sun3
Gene_synonyms:D630047F21Rik Sunc1
Gene_source:MGI:3041199



Transcript annotation


Transcript_name:BC109334
Distance:-394
Num_trans:194974
All_trans:MGI:3041199



TATA-Box annotation


Distance to TSS:-90
Nearest PromoterID:NM_001037928
Entrez ID:626870
Nearest Unigene:Mm.369429
Nearest Refseq:NM_001037928
Nearest Ensembl:ENSMUSG00000040978
Gene Name:Sad1 and UNC84 domain containing 3
Gene Alias:-
Gene Description:predicted gene 11992
Gene Type:protein-coding
CpG%:0.07
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):