Difference between revisions of "TSS:Mm 101076.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Zfpn1a1= | |Zfpn1a1= | ||
|Znfn1a1= | |Znfn1a1= | ||
| − | |all_trans= | + | |all_trans=MGI:3650903 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| − | |distance= | + | |distance=225 |
|distance_to_tss=-285 | |distance_to_tss=-285 | ||
|end=11685655 | |end=11685655 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_009578 | |nearest_refseq=NM_009578 | ||
|nearest_unigene=Mm.103545 | |nearest_unigene=Mm.103545 | ||
| − | |num_trans= | + | |num_trans=102631840 |
|species=mouse | |species=mouse | ||
|start=11685624 | |start=11685624 | ||
|start_of_center_position=11685639 | |start_of_center_position=11685639 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000145789.1 AK040327 KY467564 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101076.1 | |tss_id=mm_101076.1 | ||
Latest revision as of 10:52, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11685639 |
|---|---|
| End of the center position in the TSS region: | 11685640 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000145789.1 AK040327 KY467564 |
|---|---|
| Distance: | 225 |
| Num_trans: | 102631840 |
| All_trans: | MGI:3650903 |
TATA-Box annotation
| Distance to TSS: | -285 |
|---|---|
| Nearest PromoterID: | NM_001301868 |
| Entrez ID: | 22778 |
| Nearest Unigene: | Mm.103545 |
| Nearest Refseq: | NM_009578 |
| Nearest Ensembl: | ENSMUSG00000018654 |
| Gene Name: | predicted gene 11999 |
| Gene Alias: | 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 |
| Gene Description: | IKAROS family zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
