Difference between revisions of "TSS:Mm 101086.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000136810.7:26 uc007iav.2:26 AK050963:26 |chr=chr11 |cpg_percent=0.02 |distance=26 |distance_to_tss=-13993 |end=11822963 |entrez_id=60530 |gc_p...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:94876 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-13993 | |distance_to_tss=-13993 | ||
|end=11822963 | |end=11822963 | ||
| + | |end_of_center_position=11822955 | ||
|entrez_id=60530 | |entrez_id=60530 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:94876 | |hgnc_mgi_id=MGI:94876 | ||
|nearest_ensembl=ENSMUSG00000035455 | |nearest_ensembl=ENSMUSG00000035455 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_021891 |
|nearest_refseq=NM_021891 | |nearest_refseq=NM_021891 | ||
|nearest_unigene=Mm.236114 | |nearest_unigene=Mm.236114 | ||
| − | |num_trans= | + | |num_trans=13195 |
|species=mouse | |species=mouse | ||
|start=11822946 | |start=11822946 | ||
| + | |start_of_center_position=11822954 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000136810.7 | + | |transcript_name=ENSMUST00000136810.7 AK050963 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101086.1 | |tss_id=mm_101086.1 | ||
Latest revision as of 10:52, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11822954 |
|---|---|
| End of the center position in the TSS region: | 11822955 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000136810.7 AK050963 |
|---|---|
| Distance: | 26 |
| Num_trans: | 13195 |
| All_trans: | MGI:94876 |
TATA-Box annotation
| Distance to TSS: | -13993 |
|---|---|
| Nearest PromoterID: | NM_021891 |
| Entrez ID: | 60530 |
| Nearest Unigene: | Mm.236114 |
| Nearest Refseq: | NM_021891 |
| Nearest Ensembl: | ENSMUSG00000035455 |
| Gene Name: | dopa decarboxylase |
| Gene Alias: | - |
| Gene Description: | fidgetin-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
