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Difference between revisions of "TSS:Mm 101095.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000155690.1:0 ENSMUST00000134121.1:-19 ENSMUST00000146359.7:-22 AK149141:-22 AK011834:-22 AK160769:-22 ENSMUST00000109659.8:-29 NM_016672:-29 uc007iaw.2:-29
+
|all_trans=MGI:94876
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NM_016672
 
|nearest_refseq=NM_016672
 
|nearest_unigene=Mm.12906
 
|nearest_unigene=Mm.12906
|num_trans=9
+
|num_trans=13195
 
|species=mouse
 
|species=mouse
 
|start=11890368
 
|start=11890368

Latest revision as of 10:52, 26 July 2021

Basic information about the TSS


TSS ID:mm_101095.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:11890368
End:11890379
Strand:-
TSS Score:1
Start of the center position in the TSS region:11890373
End of the center position in the TSS region:11890374



Gene and protein annotation


Transcript_name:ENSMUST00000155690.1
Distance:0
GeneID:13195
HGNC/MGI_ID:MGI:94876
UniProt_ID:Q5SUV9
Gene_name:dopa decarboxylase
Gene_symbol:Ddc
Gene_synonyms:Aadc aromatic_L-amino_acid_decarboxylase
Gene_source:MGI:94876



Transcript annotation


Transcript_name:ENSMUST00000155690.1
Distance:0
Num_trans:13195
All_trans:MGI:94876



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NM_016672
Entrez ID:13195
Nearest Unigene:Mm.12906
Nearest Refseq:NM_016672
Nearest Ensembl:ENSMUSG00000020182
Gene Name:dopa decarboxylase
Gene Alias:Aadc
Gene Description:dopa decarboxylase
Gene Type:protein-coding
CpG%:0.025
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):