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Difference between revisions of "TSS:Mm 101096.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000146359.7:0 ENSMUST00000134121.1:0 AK149141:0 AK011834:0 AK160769:0 ENSMUST00000109659.8:-1 NM_016672:-1 ENSMUST00000155690.1:26
+
|all_trans=MGI:94876
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_016672
 
|nearest_refseq=NM_016672
 
|nearest_unigene=Mm.12906
 
|nearest_unigene=Mm.12906
|num_trans=8
+
|num_trans=13195
 
|species=mouse
 
|species=mouse
 
|start=11890394
 
|start=11890394

Latest revision as of 10:52, 26 July 2021

Basic information about the TSS


TSS ID:mm_101096.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:11890394
End:11890407
Strand:-
TSS Score:1
Start of the center position in the TSS region:11890400
End of the center position in the TSS region:11890401



Gene and protein annotation


Transcript_name:ENSMUST00000146359.7 ENSMUST00000134121.1 AK149141 AK011834 AK160769
Distance:0
GeneID:13195
HGNC/MGI_ID:MGI:94876
UniProt_ID:Q3TUH2 Q5SUV8
Gene_name:dopa decarboxylase
Gene_symbol:Ddc
Gene_synonyms:Aadc aromatic_L-amino_acid_decarboxylase
Gene_source:MGI:94876



Transcript annotation


Transcript_name:ENSMUST00000146359.7 ENSMUST00000134121.1 AK149141 AK011834 AK160769
Distance:0
Num_trans:13195
All_trans:MGI:94876



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_016672
Entrez ID:13195
Nearest Unigene:Mm.12906
Nearest Refseq:NM_016672
Nearest Ensembl:ENSMUSG00000020182
Gene Name:dopa decarboxylase
Gene Alias:Aadc
Gene Description:dopa decarboxylase
Gene Type:protein-coding
CpG%:0.03
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):