Difference between revisions of "TSS:Mm 101106.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC033917:200 BC036389:200 AK017862:405 |chr=chr11 |cpg_percent=0.01 |distance=200 |distance_to_tss=-34424 |end=11932572 |entrez_id=13195 |gc_percent=0.5...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:103232 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-34424 | |distance_to_tss=-34424 | ||
|end=11932572 | |end=11932572 | ||
| + | |end_of_center_position=11932568 | ||
|entrez_id=13195 | |entrez_id=13195 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_016672 | |nearest_refseq=NM_016672 | ||
|nearest_unigene=Mm.12906 | |nearest_unigene=Mm.12906 | ||
| − | |num_trans= | + | |num_trans=14783 |
|species=mouse | |species=mouse | ||
|start=11932563 | |start=11932563 | ||
| + | |start_of_center_position=11932567 | ||
|strand=- | |strand=- | ||
|transcript_name=BC033917 BC036389 | |transcript_name=BC033917 BC036389 | ||
Latest revision as of 10:53, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11932567 |
|---|---|
| End of the center position in the TSS region: | 11932568 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC033917 BC036389 |
|---|---|
| Distance: | 200 |
| Num_trans: | 14783 |
| All_trans: | MGI:103232 |
TATA-Box annotation
| Distance to TSS: | -34424 |
|---|---|
| Nearest PromoterID: | NM_001190448 |
| Entrez ID: | 13195 |
| Nearest Unigene: | Mm.12906 |
| Nearest Refseq: | NM_016672 |
| Nearest Ensembl: | ENSMUSG00000020182 |
| Gene Name: | growth factor receptor bound protein 10 |
| Gene Alias: | Aadc |
| Gene Description: | dopa decarboxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
