Difference between revisions of "TSS:Mm 101109.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK160651:260 |chr=chr11 |cpg_percent=0.03 |distance=260 |distance_to_tss=-35245 |end=11933406 |entrez_id=13195 |gc_percent=0.517413 |gene_alias=Aadc |ge...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:103232 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-35245 | |distance_to_tss=-35245 | ||
|end=11933406 | |end=11933406 | ||
| + | |end_of_center_position=11933390 | ||
|entrez_id=13195 | |entrez_id=13195 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_016672 | |nearest_refseq=NM_016672 | ||
|nearest_unigene=Mm.12906 | |nearest_unigene=Mm.12906 | ||
| − | |num_trans= | + | |num_trans=14783 |
|species=mouse | |species=mouse | ||
|start=11933372 | |start=11933372 | ||
| + | |start_of_center_position=11933389 | ||
|strand=- | |strand=- | ||
|transcript_name=AK160651 | |transcript_name=AK160651 | ||
Latest revision as of 10:53, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11933389 |
|---|---|
| End of the center position in the TSS region: | 11933390 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK160651 |
|---|---|
| Distance: | 260 |
| Num_trans: | 14783 |
| All_trans: | MGI:103232 |
TATA-Box annotation
| Distance to TSS: | -35245 |
|---|---|
| Nearest PromoterID: | NM_001190448 |
| Entrez ID: | 13195 |
| Nearest Unigene: | Mm.12906 |
| Nearest Refseq: | NM_016672 |
| Nearest Ensembl: | ENSMUSG00000020182 |
| Gene Name: | growth factor receptor bound protein 10 |
| Gene Alias: | Aadc |
| Gene Description: | dopa decarboxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
