Difference between revisions of "TSS:Mm 101122.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109654.7:0 NM_001177629:0 uc007iaz.2:0 BC016111:0 |chr=chr11 |cpg_percent=0.03 |distance=0 |distance_to_tss=5 |end=12027973 |entrez_id=14783...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI325020= |
| + | |Meg1= | ||
| + | |all_trans=MGI:103232 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=5 | |distance_to_tss=5 | ||
|end=12027973 | |end=12027973 | ||
| + | |end_of_center_position=12027966 | ||
|entrez_id=14783 | |entrez_id=14783 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=5730571D09Rik | + | |gene_alias=5730571D09Rik{{!}}AI325020{{!}}Meg1{{!}}mKIAA0207 |
|gene_description=growth factor receptor bound protein 10 | |gene_description=growth factor receptor bound protein 10 | ||
|gene_id=14783 | |gene_id=14783 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:103232 | |hgnc_mgi_id=MGI:103232 | ||
| + | |mKIAA0207= | ||
|nearest_ensembl=ENSMUSG00000020176 | |nearest_ensembl=ENSMUSG00000020176 | ||
|nearest_promoter_id=NM_001177629 | |nearest_promoter_id=NM_001177629 | ||
|nearest_refseq=NM_010345 | |nearest_refseq=NM_010345 | ||
|nearest_unigene=Mm.273117 | |nearest_unigene=Mm.273117 | ||
| − | |num_trans= | + | |num_trans=14783 |
|species=mouse | |species=mouse | ||
|start=12027958 | |start=12027958 | ||
| + | |start_of_center_position=12027965 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000109654.7 | + | |transcript_name=ENSMUST00000109654.7 BC016111 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101122.1 | |tss_id=mm_101122.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q60760 | + | |uniprot_id=Q60760 |
}} | }} | ||
Latest revision as of 10:53, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 12027965 |
|---|---|
| End of the center position in the TSS region: | 12027966 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109654.7 BC016111 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14783 |
| All_trans: | MGI:103232 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001177629 |
| Entrez ID: | 14783 |
| Nearest Unigene: | Mm.273117 |
| Nearest Refseq: | NM_010345 |
| Nearest Ensembl: | ENSMUSG00000020176 |
| Gene Name: | growth factor receptor bound protein 10 |
| Gene Alias: | 5730571D09Rik|AI325020|Meg1|mKIAA0207 |
| Gene Description: | growth factor receptor bound protein 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
