Difference between revisions of "TSS:Mm 101155.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF181830:-139 AK008484:288 |chr=chr11 |cpg_percent=0.01 |distance=-139 |distance_to_tss=20829 |end=16972250 |entrez_id=319701 |gc_percent=0.472637 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1860485 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=20829 | |distance_to_tss=20829 | ||
|end=16972250 | |end=16972250 | ||
| + | |end_of_center_position=16972240 | ||
|entrez_id=319701 | |entrez_id=319701 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_176982 | |nearest_refseq=NM_176982 | ||
|nearest_unigene=Mm.120672 | |nearest_unigene=Mm.120672 | ||
| − | |num_trans= | + | |num_trans=56193 |
|species=mouse | |species=mouse | ||
|start=16972228 | |start=16972228 | ||
| + | |start_of_center_position=16972239 | ||
|strand=- | |strand=- | ||
|transcript_name=AF181830 | |transcript_name=AF181830 | ||
Latest revision as of 10:54, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16972239 |
|---|---|
| End of the center position in the TSS region: | 16972240 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF181830 |
|---|---|
| Distance: | -139 |
| Num_trans: | 56193 |
| All_trans: | MGI:1860485 |
TATA-Box annotation
| Distance to TSS: | 20829 |
|---|---|
| Nearest PromoterID: | NM_176982 |
| Entrez ID: | 319701 |
| Nearest Unigene: | Mm.120672 |
| Nearest Refseq: | NM_176982 |
| Nearest Ensembl: | ENSMUSG00000044966 |
| Gene Name: | pleckstrin |
| Gene Alias: | A630050E13Rik |
| Gene Description: | F-box protein 48 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
