Personal tools

Difference between revisions of "TSS:Mm 101183.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK050340:0 AK138831:0 AK033872:0 AF181829:0 AK075810:0 AF303745:3 BC066185:4 ENSMUST00000102881.9:-15 AF073294:-15 AK151460:19 AK152501:19 AK153109:19 NM_019549:-31 uc007ibv.2:-31 AK156235:-31
+
|all_trans=MGI:1860485
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NM_019549
 
|nearest_refseq=NM_019549
 
|nearest_unigene=Mm.98232
 
|nearest_unigene=Mm.98232
|num_trans=15
+
|num_trans=56193
 
|species=mouse
 
|species=mouse
 
|start=17008647
 
|start=17008647

Latest revision as of 10:54, 26 July 2021

Basic information about the TSS


TSS ID:mm_101183.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:17008647
End:17008687
Strand:-
TSS Score:1
Start of the center position in the TSS region:17008667
End of the center position in the TSS region:17008668



Gene and protein annotation


Transcript_name:AK050340 AK138831 AK033872 AF181829 AK075810
Distance:0
GeneID:56193
HGNC/MGI_ID:MGI:1860485
UniProt_ID:Q8C6F4
Gene_name:pleckstrin
Gene_symbol:Plek
Gene_synonyms:2010300B13Rik
Gene_source:MGI:1860485



Transcript annotation


Transcript_name:AK050340 AK138831 AK033872 AF181829 AK075810
Distance:0
Num_trans:56193
All_trans:MGI:1860485



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NM_019549
Entrez ID:56193
Nearest Unigene:Mm.98232
Nearest Refseq:NM_019549
Nearest Ensembl:ENSMUSG00000020120
Gene Name:pleckstrin
Gene Alias:2010300B13Rik
Gene Description:pleckstrin
Gene Type:protein-coding
CpG%:0.025
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):