Personal tools

Difference between revisions of "TSS:Mm 101188.1"

From referenceTSS

Jump to: navigation, search
 
Line 6: Line 6:
 
|Emi3=
 
|Emi3=
 
|Imi3=
 
|Imi3=
|all_trans=ENSMUST00000020317.7:0 BC020037:0 AK007324:0 AK165942:0 AK009146:0 AK009896:0 AK017153:0 AF349950:0 AK146152:-9 AK168177:-9 NM_025443:-16 AK205314:177 ENSMUST00000123754.1:451
+
|all_trans=MGI:1913499
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 28: Line 28:
 
|nearest_refseq=NM_025443
 
|nearest_refseq=NM_025443
 
|nearest_unigene=Mm.27831
 
|nearest_unigene=Mm.27831
|num_trans=13
+
|num_trans=66249
 
|species=mouse
 
|species=mouse
 
|start=17211504
 
|start=17211504

Latest revision as of 10:55, 26 July 2021

Basic information about the TSS


TSS ID:mm_101188.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:17211504
End:17211573
Strand:-
TSS Score:1
Start of the center position in the TSS region:17211538
End of the center position in the TSS region:17211539



Gene and protein annotation


Transcript_name:ENSMUST00000020317.7 BC020037 AK007324 AK165942 AK009146 AK009896 AK017153 AF349950
Distance:0
GeneID:66249
HGNC/MGI_ID:MGI:1913499
UniProt_ID:Q9CPS7
Gene_name:partner of NOB1 homolog
Gene_symbol:Pno1
Gene_synonyms:1810003N24Rik Emi3 Imi3 expressed_during_mesenchymal_induction_3
Gene_source:MGI:1913499



Transcript annotation


Transcript_name:ENSMUST00000020317.7 BC020037 AK007324 AK165942 AK009146 AK009896 AK017153 AF349950
Distance:0
Num_trans:66249
All_trans:MGI:1913499



TATA-Box annotation


Distance to TSS:50
Nearest PromoterID:NM_025443
Entrez ID:66249
Nearest Unigene:Mm.27831
Nearest Refseq:NM_025443
Nearest Ensembl:ENSMUSG00000020116
Gene Name:partner of NOB1 homolog
Gene Alias:1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3
Gene Description:partner of NOB1 homolog
Gene Type:protein-coding
CpG%:0.09
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):