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Difference between revisions of "TSS:Mm 101204.1"

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{{TSSDetail
 
{{TSSDetail
 
|Evi8=
 
|Evi8=
|all_trans=ENSMUST00000144988.7:0 ENSMUST00000185131.7:11 NM_001193271:11 NM_010789:11 uc007icm.2:11 uc007icl.2:11 uc007icn.2:11 uc007ico.2:11 AK140748:11 AK134321:14 AK168684:19 ENSMUST00000068264.13:22 BC023689:22 ENSMUST00000125722.7:58 ENSMUST00000137300.1:58 AK049720:58 AK032947:58 AK132298:231 ENSMUST00000102878.10:266 ENSMUST00000177417.7:266 U33629:314 U33630:314
+
|all_trans=MGI:104717
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 10: Line 10:
 
|entrez_id=17268
 
|entrez_id=17268
 
|gc_percent=0.60199
 
|gc_percent=0.60199
|gene_alias=C530044H18Rik
+
|gene_alias=C530044H18Rik{{!}}Evi8
 
|gene_description=Meis homeobox 1
 
|gene_description=Meis homeobox 1
 
|gene_id=17268
 
|gene_id=17268
Line 23: Line 23:
 
|nearest_refseq=NM_010789
 
|nearest_refseq=NM_010789
 
|nearest_unigene=Mm.356578
 
|nearest_unigene=Mm.356578
|num_trans=22
+
|num_trans=17268
 
|species=mouse
 
|species=mouse
 
|start=19018979
 
|start=19018979

Latest revision as of 10:55, 26 July 2021

Basic information about the TSS


TSS ID:mm_101204.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:19018979
End:19018990
Strand:-
TSS Score:1
Start of the center position in the TSS region:19018984
End of the center position in the TSS region:19018985



Gene and protein annotation


Transcript_name:ENSMUST00000144988.7
Distance:0
GeneID:17268
HGNC/MGI_ID:MGI:104717
UniProt_ID:Q60954
Gene_name:Meis homeobox 1
Gene_symbol:Meis1
Gene_synonyms:C530044H18Rik
Gene_source:MGI:104717



Transcript annotation


Transcript_name:ENSMUST00000144988.7
Distance:0
Num_trans:17268
All_trans:MGI:104717



TATA-Box annotation


Distance to TSS:-16
Nearest PromoterID:NM_010789
Entrez ID:17268
Nearest Unigene:Mm.356578
Nearest Refseq:NM_010789
Nearest Ensembl:ENSMUSG00000020160
Gene Name:Meis homeobox 1
Gene Alias:C530044H18Rik|Evi8
Gene Description:Meis homeobox 1
Gene Type:protein-coding
CpG%:0.08
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):