Difference between revisions of "TSS:Mm 101226.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI481761= |
| + | |BC027174= | ||
| + | |Kiaa0582= | ||
| + | |all_trans=MGI:2667663 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=27 | |distance_to_tss=27 | ||
|end=20249433 | |end=20249433 | ||
| + | |end_of_center_position=20249397 | ||
|entrez_id=216543 | |entrez_id=216543 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=6030463E10Rik | + | |gene_alias=6030463E10Rik{{!}}AI481761{{!}}BC027174{{!}}Kiaa0582 |
|gene_description=centrosomal protein 68 | |gene_description=centrosomal protein 68 | ||
|gene_id=216543 | |gene_id=216543 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_172260 | |nearest_refseq=NM_172260 | ||
|nearest_unigene=Mm.260314 | |nearest_unigene=Mm.260314 | ||
| − | |num_trans= | + | |num_trans=216543 |
|species=mouse | |species=mouse | ||
|start=20249360 | |start=20249360 | ||
| + | |start_of_center_position=20249396 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218 | + | |transcript_name=ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101226.1 | |tss_id=mm_101226.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q3T9T3 Q3TRP8 Q3ULV4 Q8C0D9 | + | |uniprot_id=Q3T9T3 Q3TRP8 Q3ULV4 Q8C0D9 |
}} | }} | ||
Latest revision as of 10:55, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20249396 |
|---|---|
| End of the center position in the TSS region: | 20249397 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 |
|---|---|
| Distance: | 0 |
| Num_trans: | 216543 |
| All_trans: | MGI:2667663 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NM_172260 |
| Entrez ID: | 216543 |
| Nearest Unigene: | Mm.260314 |
| Nearest Refseq: | NM_172260 |
| Nearest Ensembl: | ENSMUSG00000044066 |
| Gene Name: | centrosomal protein 68 |
| Gene Alias: | 6030463E10Rik|AI481761|BC027174|Kiaa0582 |
| Gene Description: | centrosomal protein 68 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
