Difference between revisions of "TSS:Mm 101227.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|BC027174= | |BC027174= | ||
|Kiaa0582= | |Kiaa0582= | ||
| − | |all_trans= | + | |all_trans=MGI:5608997 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 12: | Line 12: | ||
|entrez_id=216543 | |entrez_id=216543 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=6030463E10Rik | + | |gene_alias=6030463E10Rik{{!}}AI481761{{!}}BC027174{{!}}Kiaa0582 |
|gene_description=centrosomal protein 68 | |gene_description=centrosomal protein 68 | ||
|gene_id=105180384 | |gene_id=105180384 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172260 | |nearest_refseq=NM_172260 | ||
|nearest_unigene=Mm.260314 | |nearest_unigene=Mm.260314 | ||
| − | |num_trans= | + | |num_trans=105180384 |
|species=mouse | |species=mouse | ||
|start=20289687 | |start=20289687 | ||
|start_of_center_position=20289690 | |start_of_center_position=20289690 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(AAGTATAAAAGA,-,0.00) |
|transcript_name=AK157663 | |transcript_name=AK157663 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:55, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20289690 |
|---|---|
| End of the center position in the TSS region: | 20289691 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK157663 |
|---|---|
| Distance: | -96 |
| Num_trans: | 105180384 |
| All_trans: | MGI:5608997 |
TATA-Box annotation
| Distance to TSS: | -40266 |
|---|---|
| Nearest PromoterID: | NM_172260 |
| Entrez ID: | 216543 |
| Nearest Unigene: | Mm.260314 |
| Nearest Refseq: | NM_172260 |
| Nearest Ensembl: | ENSMUSG00000044066 |
| Gene Name: | Riken cDNA F830230K02 gene |
| Gene Alias: | 6030463E10Rik|AI481761|BC027174|Kiaa0582 |
| Gene Description: | centrosomal protein 68 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(AAGTATAAAAGA,-,0.00) |
