Difference between revisions of "TSS:Mm 101231.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ASCT1= |
| + | |AW045657= | ||
| + | |SATT= | ||
| + | |all_trans=MGI:2135601 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
|end=20332688 | |end=20332688 | ||
| + | |end_of_center_position=20332672 | ||
|entrez_id=55963 | |entrez_id=55963 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=ASCT-1 | + | |gene_alias=ASCT-1{{!}}ASCT1{{!}}AW045657{{!}}SATT |
| − | |gene_description= | + | |gene_description=solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 |
|gene_id=55963 | |gene_id=55963 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 |
|gene_source=MGI:2135601 | |gene_source=MGI:2135601 | ||
|gene_symbol=Slc1a4 | |gene_symbol=Slc1a4 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_018861 | |nearest_refseq=NM_018861 | ||
|nearest_unigene=Mm.6379 | |nearest_unigene=Mm.6379 | ||
| − | |num_trans= | + | |num_trans=55963 |
|species=mouse | |species=mouse | ||
|start=20332654 | |start=20332654 | ||
| + | |start_of_center_position=20332671 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000004634.6 BC043483 AK044280 | |transcript_name=ENSMUST00000004634.6 BC043483 AK044280 | ||
Latest revision as of 10:55, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 20332671 |
|---|---|
| End of the center position in the TSS region: | 20332672 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000004634.6 BC043483 AK044280 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55963 |
| All_trans: | MGI:2135601 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_018861 |
| Entrez ID: | 55963 |
| Nearest Unigene: | Mm.6379 |
| Nearest Refseq: | NM_018861 |
| Nearest Ensembl: | ENSMUSG00000020142 |
| Gene Name: | solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 |
| Gene Alias: | ASCT-1|ASCT1|AW045657|SATT |
| Gene Description: | solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
