Difference between revisions of "TSS:Mm 101243.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000176585.7:0 AK150458:0 AK152308:0 AK152487:0 AK161532:0 ENSMUST00000134517.7:7 ENSMUST00000134897.1:27 |chr=chr11 |cpg_percent=0.025 |distanc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1923012 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=29263 | |distance_to_tss=29263 | ||
|end=20712329 | |end=20712329 | ||
| + | |end_of_center_position=20712293 | ||
|entrez_id=216549 | |entrez_id=216549 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_181411 | |nearest_refseq=NM_181411 | ||
|nearest_unigene=Mm.356580 | |nearest_unigene=Mm.356580 | ||
| − | |num_trans= | + | |num_trans=216549 |
|species=mouse | |species=mouse | ||
|start=20712256 | |start=20712256 | ||
| + | |start_of_center_position=20712292 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000176585.7 AK150458 AK152308 AK152487 AK161532 | |transcript_name=ENSMUST00000176585.7 AK150458 AK152308 AK152487 AK161532 | ||
Latest revision as of 10:56, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 20712292 |
|---|---|
| End of the center position in the TSS region: | 20712293 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000176585.7 AK150458 AK152308 AK152487 AK161532 |
|---|---|
| Distance: | 0 |
| Num_trans: | 216549 |
| All_trans: | MGI:1923012 |
TATA-Box annotation
| Distance to TSS: | 29263 |
|---|---|
| Nearest PromoterID: | NM_001290545 |
| Entrez ID: | 216549 |
| Nearest Unigene: | Mm.356580 |
| Nearest Refseq: | NM_181411 |
| Nearest Ensembl: | ENSMUSG00000049659 |
| Gene Name: | aftiphilin |
| Gene Alias: | - |
| Gene Description: | aftiphilin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
