Difference between revisions of "TSS:Mm 101284.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001316675:104 NM_008618:104 uc007idv.2:104 ENSMUST00000102874.10:-144 AK005237:208 uc029rkv.1:220 AK046369:220 AK077724:222 AK164785:224 M29462:225 A...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |D17921= |
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
| + | |all_trans=MGI:97051 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-109 | |distance_to_tss=-109 | ||
|end=21572049 | |end=21572049 | ||
| + | |end_of_center_position=21572044 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik{{!}}D17921{{!}}MDH-s{{!}}MDHA{{!}}Mor-2{{!}}Mor2 |
| − | |gene_description= | + | |gene_description=malate dehydrogenase 1, NAD (soluble) |
|gene_id=17449 | |gene_id=17449 | ||
| − | |gene_name= | + | |gene_name=malate dehydrogenase 1, NAD (soluble) |
|gene_source=MGI:97051 | |gene_source=MGI:97051 | ||
|gene_symbol=Mdh1 | |gene_symbol=Mdh1 | ||
| Line 21: | Line 27: | ||
|nearest_refseq=NM_008618 | |nearest_refseq=NM_008618 | ||
|nearest_unigene=Mm.212703 | |nearest_unigene=Mm.212703 | ||
| − | |num_trans= | + | |num_trans=17449 |
|species=mouse | |species=mouse | ||
|start=21572037 | |start=21572037 | ||
| + | |start_of_center_position=21572043 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000239073.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101284.1 | |tss_id=mm_101284.1 | ||
Latest revision as of 10:57, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21572043 |
|---|---|
| End of the center position in the TSS region: | 21572044 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000239073.1 |
|---|---|
| Distance: | 104 |
| Num_trans: | 17449 |
| All_trans: | MGI:97051 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001316675 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | malate dehydrogenase 1, NAD (soluble) |
| Gene Alias: | B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 |
| Gene Description: | malate dehydrogenase 1, NAD (soluble) |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
