Difference between revisions of "TSS:Mm 101299.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|Flj21950= | |Flj21950= | ||
|NACSIN= | |NACSIN= | ||
| − | |all_trans= | + | |all_trans=MGI:2667252 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 11: | Line 11: | ||
|entrez_id=216565 | |entrez_id=216565 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=AF424697 | + | |gene_alias=AF424697{{!}}Flj21950{{!}}NACSIN |
|gene_description=EH domain binding protein 1 | |gene_description=EH domain binding protein 1 | ||
|gene_id=216565 | |gene_id=216565 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_153078 | |nearest_refseq=NM_153078 | ||
|nearest_unigene=Mm.491265 | |nearest_unigene=Mm.491265 | ||
| − | |num_trans= | + | |num_trans=216565 |
|species=mouse | |species=mouse | ||
|start=22286821 | |start=22286821 | ||
|start_of_center_position=22286843 | |start_of_center_position=22286843 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000180360.7 ENSMUST00000109563.8 | + | |transcript_name=ENSMUST00000180360.7 ENSMUST00000109563.8 AK173055 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101299.1 | |tss_id=mm_101299.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q69ZW3 | + | |uniprot_id=Q69ZW3 |
}} | }} | ||
Latest revision as of 10:57, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 22286843 |
|---|---|
| End of the center position in the TSS region: | 22286844 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000180360.7 ENSMUST00000109563.8 AK173055 |
|---|---|
| Distance: | 27 |
| Num_trans: | 216565 |
| All_trans: | MGI:2667252 |
TATA-Box annotation
| Distance to TSS: | -48 |
|---|---|
| Nearest PromoterID: | NM_001252515 |
| Entrez ID: | 216565 |
| Nearest Unigene: | Mm.491265 |
| Nearest Refseq: | NM_153078 |
| Nearest Ensembl: | ENSMUSG00000042302 |
| Gene Name: | EH domain binding protein 1 |
| Gene Alias: | AF424697|Flj21950|NACSIN |
| Gene Description: | EH domain binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
