Difference between revisions of "TSS:Mm 101322.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK160088:0 AY043479:5 NM_016888:-22 uc007ieh.2:-22 ENSMUST00000189990.1:140 AF092050:172 ENSMUST00000062844.10:-388 |chr=chr11 |cpg_percent=0.155 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |AA409404= |
| + | |AW260308= | ||
| + | |B3Galt6= | ||
| + | |B3gnt1= | ||
| + | |BGnT-1= | ||
| + | |BGnT-2= | ||
| + | |BGnT1= | ||
| + | |BGnT2= | ||
| + | |Beta3gnt= | ||
| + | |all_trans=MGI:1889505 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 6: | Line 15: | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=22859713 | |end=22859713 | ||
| + | |end_of_center_position=22859699 | ||
|entrez_id=53625 | |entrez_id=53625 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=AA408337 | + | |gene_alias=AA408337{{!}}AA409404{{!}}AW260308{{!}}B3Galt6{{!}}B3gnt1{{!}}BGnT-1{{!}}BGnT-2{{!}}BGnT1{{!}}BGnT2{{!}}Beta3gnt |
| − | |gene_description= | + | |gene_description=UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
|gene_id=53625 | |gene_id=53625 | ||
| − | |gene_name= | + | |gene_name=UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
|gene_source=MGI:1889505 | |gene_source=MGI:1889505 | ||
|gene_symbol=B3gnt2 | |gene_symbol=B3gnt2 | ||
| Line 21: | Line 31: | ||
|nearest_refseq=NM_016888 | |nearest_refseq=NM_016888 | ||
|nearest_unigene=Mm.395495 | |nearest_unigene=Mm.395495 | ||
| − | |num_trans= | + | |num_trans=53625 |
|species=mouse | |species=mouse | ||
|start=22859684 | |start=22859684 | ||
| + | |start_of_center_position=22859698 | ||
|strand=- | |strand=- | ||
|transcript_name=AK160088 | |transcript_name=AK160088 | ||
| Line 29: | Line 40: | ||
|tss_id=mm_101322.1 | |tss_id=mm_101322.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3TVJ9 |
}} | }} | ||
Latest revision as of 10:57, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22859698 |
|---|---|
| End of the center position in the TSS region: | 22859699 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK160088 |
|---|---|
| Distance: | 0 |
| Num_trans: | 53625 |
| All_trans: | MGI:1889505 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_016888 |
| Entrez ID: | 53625 |
| Nearest Unigene: | Mm.395495 |
| Nearest Refseq: | NM_016888 |
| Nearest Ensembl: | ENSMUSG00000051650 |
| Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
| Gene Alias: | AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt |
| Gene Description: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
