Difference between revisions of "TSS:Mm 101333.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc056yka.1:0 AK088668:0 |chr=chr11 |cpg_percent=0.165 |distance=0 |distance_to_tss=-586 |end=23306316 |entrez_id=17847 |gc_percent=0.79602 |gene_alias=A...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Murr2= |
| + | |all_trans=MGI:3781894 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-586 | |distance_to_tss=-586 | ||
|end=23306316 | |end=23306316 | ||
| + | |end_of_center_position=23306310 | ||
|entrez_id=17847 | |entrez_id=17847 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=A530081C03Rik | + | |gene_alias=A530081C03Rik{{!}}Murr2 |
|gene_description=ubiquitin specific peptidase 34 | |gene_description=ubiquitin specific peptidase 34 | ||
|gene_id=100042202 | |gene_id=100042202 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_001190401 | |nearest_refseq=NM_001190401 | ||
|nearest_unigene=Mm.119155 | |nearest_unigene=Mm.119155 | ||
| − | |num_trans= | + | |num_trans=100042202 |
|species=mouse | |species=mouse | ||
|start=23306302 | |start=23306302 | ||
| + | |start_of_center_position=23306309 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK088668 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101333.1 | |tss_id=mm_101333.1 | ||
Latest revision as of 10:58, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23306309 |
|---|---|
| End of the center position in the TSS region: | 23306310 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK088668 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100042202 |
| All_trans: | MGI:3781894 |
TATA-Box annotation
| Distance to TSS: | -586 |
|---|---|
| Nearest PromoterID: | NM_001190401 |
| Entrez ID: | 17847 |
| Nearest Unigene: | Mm.119155 |
| Nearest Refseq: | NM_001190401 |
| Nearest Ensembl: | ENSMUSG00000056342 |
| Gene Name: | predicted gene 3718 |
| Gene Alias: | A530081C03Rik|Murr2 |
| Gene Description: | ubiquitin specific peptidase 34 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
