Difference between revisions of "TSS:Mm 101336.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_172391:11 NM_001290655:11 NM_001290654 | + | |all_trans=NM_172391:11 NM_001290655:11 NM_001290654:11 ENSMUST00000020529.12:20 AK137116:101 AK154196:102 AK155265:102 AK093945:104 AK033696:104 BC052829:105 ENSMUST00000109539.7:120 BC038397:120 ENSMUST00000147157.7:145 BC055873:149 ENSMUST00000128559.1:155 BC064012:191 AK186357:258 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=AHA1, activator of heat shock protein ATPase 2 |
|gene_id=268390 | |gene_id=268390 | ||
| − | |gene_name= | + | |gene_name=AHA1, activator of heat shock protein ATPase 2 |
|gene_source=MGI:1916133 | |gene_source=MGI:1916133 | ||
|gene_symbol=Ahsa2 | |gene_symbol=Ahsa2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172391 | |nearest_refseq=NM_172391 | ||
|nearest_unigene=Mm.13148 | |nearest_unigene=Mm.13148 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=23498049 | |start=23498049 | ||
|start_of_center_position=23498055 | |start_of_center_position=23498055 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001290655.1 NM_172391.4 NM_001290654.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101336.1 | |tss_id=mm_101336.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N9S3 | + | |uniprot_id=Q8N9S3 |
}} | }} | ||
Latest revision as of 10:58, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23498055 |
|---|---|
| End of the center position in the TSS region: | 23498056 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001290655.1 NM_172391.4 NM_001290654.1 |
|---|---|
| Distance: | 11 |
| Num_trans: | 17 |
| All_trans: | NM_172391:11 NM_001290655:11 NM_001290654:11 ENSMUST00000020529.12:20 AK137116:101 AK154196:102 AK155265:102 AK093945:104 AK033696:104 BC052829:105 ENSMUST00000109539.7:120 BC038397:120 ENSMUST00000147157.7:145 BC055873:149 ENSMUST00000128559.1:155 BC064012:191 AK186357:258 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_172391 |
| Entrez ID: | 268390 |
| Nearest Unigene: | Mm.13148 |
| Nearest Refseq: | NM_172391 |
| Nearest Ensembl: | ENSMUSG00000020288 |
| Gene Name: | AHA1, activator of heat shock protein ATPase 2 |
| Gene Alias: | - |
| Gene Description: | AHA1, activator of heat shock protein ATPase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
