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Difference between revisions of "TSS:Mm 101371.1"

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(Created page with "{{TSSDetail |all_trans=AK031627:0 BC139447:-121 BC139448:-121 BC139770:-123 ENSMUST00000102864.4:-181 NM_009044:-181 uc007ifo.1:-181 X15842:-181 X60271:-181 AK172490:-204 |chr...")
 
 
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{{TSSDetail
 
{{TSSDetail
|all_trans=AK031627:0 BC139447:-121 BC139448:-121 BC139770:-123 ENSMUST00000102864.4:-181 NM_009044:-181 uc007ifo.1:-181 X15842:-181 X60271:-181 AK172490:-204
+
|all_trans=MGI:97897
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.08
 
|cpg_percent=0.08
 
|distance=0
 
|distance=0
|distance_to_tss=200
+
|distance_to_tss=199
 
|end=23770789
 
|end=23770789
 +
|end_of_center_position=23770770
 
|entrez_id=19696
 
|entrez_id=19696
 
|gc_percent=0.681592
 
|gc_percent=0.681592
Line 21: Line 22:
 
|nearest_refseq=NM_009044
 
|nearest_refseq=NM_009044
 
|nearest_unigene=Mm.4869
 
|nearest_unigene=Mm.4869
|num_trans=10
+
|num_trans=19696
 
|species=mouse
 
|species=mouse
 
|start=23770750
 
|start=23770750
 +
|start_of_center_position=23770769
 
|strand=-
 
|strand=-
 
|transcript_name=AK031627
 
|transcript_name=AK031627

Latest revision as of 10:58, 26 July 2021

Basic information about the TSS


TSS ID:mm_101371.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:23770750
End:23770789
Strand:-
TSS Score:1
Start of the center position in the TSS region:23770769
End of the center position in the TSS region:23770770



Gene and protein annotation


Transcript_name:AK031627
Distance:0
GeneID:19696
HGNC/MGI_ID:MGI:97897
UniProt_ID:
Gene_name:reticuloendotheliosis oncogene
Gene_symbol:Rel
Gene_synonyms:c-Rel
Gene_source:MGI:97897



Transcript annotation


Transcript_name:AK031627
Distance:0
Num_trans:19696
All_trans:MGI:97897



TATA-Box annotation


Distance to TSS:199
Nearest PromoterID:NM_009044
Entrez ID:19696
Nearest Unigene:Mm.4869
Nearest Refseq:NM_009044
Nearest Ensembl:ENSMUSG00000020275
Gene Name:reticuloendotheliosis oncogene
Gene Alias:c-Rel
Gene Description:reticuloendotheliosis oncogene
Gene Type:protein-coding
CpG%:0.08
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):