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Difference between revisions of "TSS:Mm 101372.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK031627:33 BC139447:-102 BC139448:-102 BC139770:-104 ENSMUST00000102864.4:-162 NM_009044:-162 uc007ifo.1:-162 X15842:-162 X60271:-162 AK172490:-185
+
|all_trans=MGI:97897
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.065
 
|cpg_percent=0.065
 
|distance=33
 
|distance=33
|distance_to_tss=166
+
|distance_to_tss=165
 
|end=23770808
 
|end=23770808
 
|end_of_center_position=23770804
 
|end_of_center_position=23770804
Line 22: Line 22:
 
|nearest_refseq=NM_009044
 
|nearest_refseq=NM_009044
 
|nearest_unigene=Mm.4869
 
|nearest_unigene=Mm.4869
|num_trans=10
+
|num_trans=19696
 
|species=mouse
 
|species=mouse
 
|start=23770799
 
|start=23770799

Latest revision as of 10:59, 26 July 2021

Basic information about the TSS


TSS ID:mm_101372.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:23770799
End:23770808
Strand:-
TSS Score:1
Start of the center position in the TSS region:23770803
End of the center position in the TSS region:23770804



Gene and protein annotation


Transcript_name:AK031627
Distance:33
GeneID:19696
HGNC/MGI_ID:MGI:97897
UniProt_ID:
Gene_name:reticuloendotheliosis oncogene
Gene_symbol:Rel
Gene_synonyms:c-Rel
Gene_source:MGI:97897



Transcript annotation


Transcript_name:AK031627
Distance:33
Num_trans:19696
All_trans:MGI:97897



TATA-Box annotation


Distance to TSS:165
Nearest PromoterID:NM_009044
Entrez ID:19696
Nearest Unigene:Mm.4869
Nearest Refseq:NM_009044
Nearest Ensembl:ENSMUSG00000020275
Gene Name:reticuloendotheliosis oncogene
Gene Alias:c-Rel
Gene Description:reticuloendotheliosis oncogene
Gene Type:protein-coding
CpG%:0.065
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):