Difference between revisions of "TSS:Mm 101388.1"
From referenceTSS
| Line 7: | Line 7: | ||
|Evi9b= | |Evi9b= | ||
|Evi9c= | |Evi9c= | ||
| − | |all_trans= | + | |all_trans=MGI:1925450 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_016707 | |nearest_refseq=NM_016707 | ||
|nearest_unigene=Mm.53687 | |nearest_unigene=Mm.53687 | ||
| − | |num_trans= | + | |num_trans=78200 |
|species=mouse | |species=mouse | ||
|start=24172766 | |start=24172766 | ||
|start_of_center_position=24172769 | |start_of_center_position=24172769 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000146717.1 | + | |transcript_name=ENSMUST00000146717.1 AK019722 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101388.1 | |tss_id=mm_101388.1 | ||
Latest revision as of 10:59, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24172769 |
|---|---|
| End of the center position in the TSS region: | 24172770 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146717.1 AK019722 |
|---|---|
| Distance: | -8 |
| Num_trans: | 78200 |
| All_trans: | MGI:1925450 |
TATA-Box annotation
| Distance to TSS: | 92075 |
|---|---|
| Nearest PromoterID: | NM_001159290 |
| Entrez ID: | 14025 |
| Nearest Unigene: | Mm.53687 |
| Nearest Refseq: | NM_016707 |
| Nearest Ensembl: | ENSMUSG00000000861 |
| Gene Name: | RIKEN cDNA 4930538E20 gene |
| Gene Alias: | 2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809 |
| Gene Description: | B cell CLL/lymphoma 11A (zinc finger protein) |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
