Difference between revisions of "TSS:Mm 101412.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2445069 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=100 | |distance_to_tss=100 | ||
|end=28584229 | |end=28584229 | ||
| + | |end_of_center_position=28584225 | ||
|entrez_id=216613 | |entrez_id=216613 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:2445069 | |hgnc_mgi_id=MGI:2445069 | ||
|nearest_ensembl=ENSMUSG00000032878 | |nearest_ensembl=ENSMUSG00000032878 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_181577 |
|nearest_refseq=NM_181577 | |nearest_refseq=NM_181577 | ||
|nearest_unigene=Mm.93759 | |nearest_unigene=Mm.93759 | ||
| − | |num_trans= | + | |num_trans=216613 |
|species=mouse | |species=mouse | ||
|start=28584219 | |start=28584219 | ||
| + | |start_of_center_position=28584224 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109501.1 AK087049 AK087070 | |transcript_name=ENSMUST00000109501.1 AK087049 AK087070 | ||
Latest revision as of 10:59, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 28584224 |
|---|---|
| End of the center position in the TSS region: | 28584225 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000109501.1 AK087049 AK087070 |
|---|---|
| Distance: | -37 |
| Num_trans: | 216613 |
| All_trans: | MGI:2445069 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NM_181577 |
| Entrez ID: | 216613 |
| Nearest Unigene: | Mm.93759 |
| Nearest Refseq: | NM_181577 |
| Nearest Ensembl: | ENSMUSG00000032878 |
| Gene Name: | coiled-coil domain containing 85A |
| Gene Alias: | - |
| Gene Description: | coiled-coil domain containing 85A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
