Difference between revisions of "TSS:Mm 101416.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000141862.7:0 NM_025740:0 uc007igu.1:0 AK075858:0 AK016479:0 BC005731:0 AK010468:0 ENSMUST00000127940.1:17 ENSMUST00000020754.9:-80 ENSMUST0000...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |4931428D14Rik= |
| + | |Ccdc104= | ||
| + | |all_trans=MGI:1913994 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=29247329 | |end=29247329 | ||
| + | |end_of_center_position=29247269 | ||
|entrez_id=216618 | |entrez_id=216618 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=2300003H10 | + | |gene_alias=2300003H10{{!}}4931428D14Rik{{!}}Ccdc104 |
|gene_description=cilia and flagella associated protein 36 | |gene_description=cilia and flagella associated protein 36 | ||
|gene_id=216618 | |gene_id=216618 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_025740 | |nearest_refseq=NM_025740 | ||
|nearest_unigene=Mm.128663 | |nearest_unigene=Mm.128663 | ||
| − | |num_trans= | + | |num_trans=216618 |
|species=mouse | |species=mouse | ||
|start=29247208 | |start=29247208 | ||
| + | |start_of_center_position=29247268 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000141862.7 | + | |transcript_name=ENSMUST00000141862.7 AK075858 AK016479 BC005731 AK010468 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101416.1 | |tss_id=mm_101416.1 | ||
Latest revision as of 10:59, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29247268 |
|---|---|
| End of the center position in the TSS region: | 29247269 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000141862.7 AK075858 AK016479 BC005731 AK010468 |
|---|---|
| Distance: | 0 |
| Num_trans: | 216618 |
| All_trans: | MGI:1913994 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_025740 |
| Entrez ID: | 216618 |
| Nearest Unigene: | Mm.128663 |
| Nearest Refseq: | NM_025740 |
| Nearest Ensembl: | ENSMUSG00000020462 |
| Gene Name: | cilia and flagella associated protein 36 |
| Gene Alias: | 2300003H10|4931428D14Rik|Ccdc104 |
| Gene Description: | cilia and flagella associated protein 36 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
