Difference between revisions of "TSS:Mm 101418.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|Ncrna00117= | |Ncrna00117= | ||
|Prdxdd1= | |Prdxdd1= | ||
| − | |all_trans= | + | |all_trans=MGI:1915189 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 11: | Line 11: | ||
|entrez_id=67939 | |entrez_id=67939 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=2010316F05Rik | + | |gene_alias=2010316F05Rik{{!}}Ncrna00117{{!}}Prdxdd1 |
|gene_description=prolyl-tRNA synthetase domain containing 1 | |gene_description=prolyl-tRNA synthetase domain containing 1 | ||
|gene_id=67939 | |gene_id=67939 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_026465 | |nearest_refseq=NM_026465 | ||
|nearest_unigene=Mm.251087 | |nearest_unigene=Mm.251087 | ||
| − | |num_trans= | + | |num_trans=67939 |
|species=mouse | |species=mouse | ||
|start=29515017 | |start=29515017 | ||
|start_of_center_position=29515028 | |start_of_center_position=29515028 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000133103.1 ENSMUST00000039900.3 | + | |transcript_name=ENSMUST00000133103.1 ENSMUST00000039900.3 AK077280 AK008574 BC115900 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101418.1 | |tss_id=mm_101418.1 | ||
Latest revision as of 10:59, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29515028 |
|---|---|
| End of the center position in the TSS region: | 29515029 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000133103.1 ENSMUST00000039900.3 AK077280 AK008574 BC115900 |
|---|---|
| Distance: | 0 |
| Num_trans: | 67939 |
| All_trans: | MGI:1915189 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_026465 |
| Entrez ID: | 67939 |
| Nearest Unigene: | Mm.251087 |
| Nearest Refseq: | NM_026465 |
| Nearest Ensembl: | ENSMUSG00000032673 |
| Gene Name: | prolyl-tRNA synthetase domain containing 1 |
| Gene Alias: | 2010316F05Rik|Ncrna00117|Prdxdd1 |
| Gene Description: | prolyl-tRNA synthetase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
