Difference between revisions of "TSS:Mm 101420.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC081446:-382 BC096392:-382 BC002108:-486 ENSMUST00000102844.3:-496 AK018706:-497 |chr=chr11 |cpg_percent=0.05 |distance=-382 |distance_to_tss=-587 |end...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1925544 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-587 | |distance_to_tss=-587 | ||
|end=29547364 | |end=29547364 | ||
| + | |end_of_center_position=29547363 | ||
|entrez_id=73324 | |entrez_id=73324 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_028504 | |nearest_refseq=NM_028504 | ||
|nearest_unigene=Mm.69388 | |nearest_unigene=Mm.69388 | ||
| − | |num_trans= | + | |num_trans=78294 |
|species=mouse | |species=mouse | ||
|start=29547361 | |start=29547361 | ||
| + | |start_of_center_position=29547362 | ||
|strand=- | |strand=- | ||
|transcript_name=BC081446 BC096392 | |transcript_name=BC081446 BC096392 | ||
Latest revision as of 11:00, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29547362 |
|---|---|
| End of the center position in the TSS region: | 29547363 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC081446 BC096392 |
|---|---|
| Distance: | -382 |
| Num_trans: | 78294 |
| All_trans: | MGI:1925544 |
TATA-Box annotation
| Distance to TSS: | -587 |
|---|---|
| Nearest PromoterID: | NM_028504 |
| Entrez ID: | 73324 |
| Nearest Unigene: | Mm.69388 |
| Nearest Refseq: | NM_028504 |
| Nearest Ensembl: | ENSMUSG00000020461 |
| Gene Name: | ribosomal protein S27A |
| Gene Alias: | 1700034F02Rik |
| Gene Description: | clathrin heavy chain linker domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
