Difference between revisions of "TSS:Mm 101427.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2441689 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 12: | Line 12: | ||
|gene_description=RIKEN cDNA 4931440F15 gene | |gene_description=RIKEN cDNA 4931440F15 gene | ||
|gene_id=216622 | |gene_id=216622 | ||
| − | |gene_name= | + | |gene_name=fem-1 homolog A like |
|gene_source=MGI:2441689 | |gene_source=MGI:2441689 | ||
| − | |gene_symbol= | + | |gene_symbol=Fem1al |
| − | |gene_synonyms= | + | |gene_synonyms=4931440F15Rik |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2441689 | |hgnc_mgi_id=MGI:2441689 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_176829 | |nearest_refseq=NM_176829 | ||
|nearest_unigene=Mm.443260 | |nearest_unigene=Mm.443260 | ||
| − | |num_trans= | + | |num_trans=216622 |
|species=mouse | |species=mouse | ||
|start=29825649 | |start=29825649 | ||
|start_of_center_position=29825664 | |start_of_center_position=29825664 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000104962 | + | |transcript_name=ENSMUST00000104962.1 AK029918 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101427.1 | |tss_id=mm_101427.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8C0T1 | + | |uniprot_id=Q8C0T1 |
}} | }} | ||
Latest revision as of 11:00, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29825664 |
|---|---|
| End of the center position in the TSS region: | 29825665 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000104962.1 AK029918 |
|---|---|
| Distance: | 0 |
| Num_trans: | 216622 |
| All_trans: | MGI:2441689 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_176829 |
| Entrez ID: | 216622 |
| Nearest Unigene: | Mm.443260 |
| Nearest Refseq: | NM_176829 |
| Nearest Ensembl: | ENSMUSG00000078157 |
| Gene Name: | fem-1 homolog A like |
| Gene Alias: | Fem1ab |
| Gene Description: | RIKEN cDNA 4931440F15 gene |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
