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Difference between revisions of "TSS:Mm 10145.1"

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Line 6: Line 6:
 
|Gm13190=
 
|Gm13190=
 
|OTTMUSG00000010806=
 
|OTTMUSG00000010806=
|all_trans=ENSMUST00000175669.7:-20 ENSMUST00000147156.8:317 uc008ieq.1:317 AK078493:317 ENSMUST00000176803.7:435
+
|all_trans=MGI:1919850
 
|chr=chr2
 
|chr=chr2
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 15: Line 15:
 
|entrez_id=209630
 
|entrez_id=209630
 
|gc_percent=0.562189
 
|gc_percent=0.562189
|gene_alias=2700017I06Rik
+
|gene_alias=2700017I06Rik{{!}}5330420J21{{!}}AI594879{{!}}C230040M21Rik{{!}}Frmd4{{!}}Gm13190{{!}}mKIAA1294
 
|gene_description=FERM domain containing 4A
 
|gene_description=FERM domain containing 4A
 
|gene_id=209630
 
|gene_id=209630
Line 29: Line 29:
 
|nearest_refseq=NM_172475
 
|nearest_refseq=NM_172475
 
|nearest_unigene=Mm.37932
 
|nearest_unigene=Mm.37932
|num_trans=5
+
|num_trans=209630
 
|species=mouse
 
|species=mouse
 
|start=4300537
 
|start=4300537

Latest revision as of 11:00, 26 July 2021

Basic information about the TSS


TSS ID:mm_10145.1
Species:mouse
Chr:chr2
TSS Classification:yes
Start:4300537
End:4300568
Strand:+
TSS Score:1
Start of the center position in the TSS region:4300552
End of the center position in the TSS region:4300553



Gene and protein annotation


Transcript_name:ENSMUST00000175669.7
Distance:-20
GeneID:209630
HGNC/MGI_ID:MGI:1919850
UniProt_ID:H3BK97
Gene_name:FERM domain containing 4A
Gene_symbol:Frmd4a
Gene_synonyms:2700017I06Rik C230040M21Rik Gm13190
Gene_source:MGI:1919850



Transcript annotation


Transcript_name:ENSMUST00000175669.7
Distance:-20
Num_trans:209630
All_trans:MGI:1919850



TATA-Box annotation


Distance to TSS:-100423
Nearest PromoterID:NM_001177843
Entrez ID:209630
Nearest Unigene:Mm.37932
Nearest Refseq:NM_172475
Nearest Ensembl:ENSMUSG00000026657
Gene Name:FERM domain containing 4A
Gene Alias:2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294
Gene Description:FERM domain containing 4A
Gene Type:protein-coding
CpG%:0.04
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):