Difference between revisions of "TSS:Mm 101465.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001100394:46 uc007ihv.1:46 uc011xst.1:46 AK015698:46 ENSMUST00000152718.1:48 ENSMUST00000041763.13:67 BC049719:67 |chr=chr11 |cpg_percent=0.04 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1922337 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-51 | |distance_to_tss=-51 | ||
|end=30471886 | |end=30471886 | ||
| + | |end_of_center_position=30471881 | ||
|entrez_id=75087 | |entrez_id=75087 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001100394 | |nearest_refseq=NM_001100394 | ||
|nearest_unigene=Mm.159422 | |nearest_unigene=Mm.159422 | ||
| − | |num_trans= | + | |num_trans=75087 |
|species=mouse | |species=mouse | ||
|start=30471874 | |start=30471874 | ||
| + | |start_of_center_position=30471880 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK015698 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101465.1 | |tss_id=mm_101465.1 | ||
Latest revision as of 11:00, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 30471880 |
|---|---|
| End of the center position in the TSS region: | 30471881 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK015698 |
|---|---|
| Distance: | 46 |
| Num_trans: | 75087 |
| All_trans: | MGI:1922337 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NM_001100394 |
| Entrez ID: | 75087 |
| Nearest Unigene: | Mm.159422 |
| Nearest Refseq: | NM_001100394 |
| Nearest Ensembl: | ENSMUSG00000040919 |
| Gene Name: | RIKEN cDNA 4930505A04 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 4930505A04 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
