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Difference between revisions of "TSS:Mm 101480.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC025100:0 AK007629:0 ENSMUST00000020553.4:-38 AK010914:-38 AK021391:-38 AK156798:-51 ENSMUST00000101394.4:-54 AK078993:-54 NM_026527:-69 NM_001290667:-69
+
|all_trans=MGI:1915294
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NM_026527
 
|nearest_refseq=NM_026527
 
|nearest_unigene=Mm.32656
 
|nearest_unigene=Mm.32656
|num_trans=10
+
|num_trans=68044
 
|species=mouse
 
|species=mouse
 
|start=30986264
 
|start=30986264

Latest revision as of 11:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_101480.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:30986264
End:30986296
Strand:-
TSS Score:1
Start of the center position in the TSS region:30986280
End of the center position in the TSS region:30986281



Gene and protein annotation


Transcript_name:BC025100 AK007629
Distance:0
GeneID:68044
HGNC/MGI_ID:MGI:1915294
UniProt_ID:
Gene_name:ChaC, cation transport regulator 2
Gene_symbol:Chac2
Gene_synonyms:2510006C20Rik
Gene_source:MGI:1915294



Transcript annotation


Transcript_name:BC025100 AK007629
Distance:0
Num_trans:68044
All_trans:MGI:1915294



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NM_001290667
Entrez ID:68044
Nearest Unigene:Mm.32656
Nearest Refseq:NM_026527
Nearest Ensembl:ENSMUSG00000020309
Gene Name:ChaC, cation transport regulator 2
Gene Alias:-
Gene Description:ChaC, cation transport regulator 2
Gene Type:protein-coding
CpG%:0.045
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):