Difference between revisions of "TSS:Mm 101490.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001024919 | + | |BOD2.1= |
| + | |Fam44b= | ||
| + | |all_trans=NM_001024919:-6 ENSMUST00000058060.13:-29 BC116435:-63 BC116436:-63 BC128508:-63 BC128509:-63 LF226703:75 MA462280:75 ENSMUST00000109415.1:78 LF198417:-91 MA433994:-91 AK009485:167 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
|end=31671856 | |end=31671856 | ||
| + | |end_of_center_position=31671831 | ||
|entrez_id=69556 | |entrez_id=69556 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=2310022M17Rik | + | |gene_alias=2310022M17Rik{{!}}BOD2.1{{!}}Fam44b |
|gene_description=biorientation of chromosomes in cell division 1 | |gene_description=biorientation of chromosomes in cell division 1 | ||
|gene_id=69556 | |gene_id=69556 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_001024919 | |nearest_refseq=NM_001024919 | ||
|nearest_unigene=Mm.34183 | |nearest_unigene=Mm.34183 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=31671804 | |start=31671804 | ||
| + | |start_of_center_position=31671830 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001024919 | + | |transcript_name=NM_001024919.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101490.1 | |tss_id=mm_101490.1 | ||
Latest revision as of 11:01, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 31671830 |
|---|---|
| End of the center position in the TSS region: | 31671831 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001024919.1 |
|---|---|
| Distance: | -6 |
| Num_trans: | 12 |
| All_trans: | NM_001024919:-6 ENSMUST00000058060.13:-29 BC116435:-63 BC116436:-63 BC128508:-63 BC128509:-63 LF226703:75 MA462280:75 ENSMUST00000109415.1:78 LF198417:-91 MA433994:-91 AK009485:167 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001024919 |
| Entrez ID: | 69556 |
| Nearest Unigene: | Mm.34183 |
| Nearest Refseq: | NM_001024919 |
| Nearest Ensembl: | ENSMUSG00000044502 |
| Gene Name: | biorientation of chromosomes in cell division 1 |
| Gene Alias: | 2310022M17Rik|BOD2.1|Fam44b |
| Gene Description: | biorientation of chromosomes in cell division 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
