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Difference between revisions of "TSS:Mm 101496.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000129425.7:0 ENSMUST00000126265.1:0 ENSMUST00000134944.1:-44 AK085420:-44 AK158233:-49 NR_102314:-67 NR_102312:-67 NR_102311:-67 NR_102310:-67 uc007iin.1:-67 uc033fug.1:-67 uc007iio.1:-67 uc011xsw.1:-67 AK158188:-67
+
|all_trans=MGI:3041224
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
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|hgnc_mgi_id=MGI:3041224
 
|hgnc_mgi_id=MGI:3041224
 
|nearest_ensembl=ENSMUSG00000085772
 
|nearest_ensembl=ENSMUSG00000085772
|nearest_promoter_id=NR_102310
+
|nearest_promoter_id=NR_102311
 
|nearest_refseq=NR_102310
 
|nearest_refseq=NR_102310
 
|nearest_unigene=Mm.150222
 
|nearest_unigene=Mm.150222
|num_trans=14
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=31824463
 
|start=31824463

Latest revision as of 11:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_101496.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:31824463
End:31824480
Strand:-
TSS Score:1
Start of the center position in the TSS region:31824471
End of the center position in the TSS region:31824472



Gene and protein annotation


Transcript_name:ENSMUST00000129425.7 ENSMUST00000126265.1
Distance:0
GeneID:
HGNC/MGI_ID:MGI:3041224
UniProt_ID:
Gene_name:RIKEN cDNA D630024D03 gene
Gene_symbol:D630024D03Rik
Gene_synonyms:
Gene_source:MGI:3041224



Transcript annotation


Transcript_name:ENSMUST00000129425.7 ENSMUST00000126265.1
Distance:0
Num_trans:
All_trans:MGI:3041224



TATA-Box annotation


Distance to TSS:75
Nearest PromoterID:NR_102311
Entrez ID:414116
Nearest Unigene:Mm.150222
Nearest Refseq:NR_102310
Nearest Ensembl:ENSMUSG00000085772
Gene Name:RIKEN cDNA D630024D03 gene
Gene Alias:-
Gene Description:RIKEN cDNA D630024D03 gene
Gene Type:ncRNA
CpG%:0.015
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):