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Difference between revisions of "TSS:Mm 101506.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000020518.10:188 ENSMUST00000131979.1:188 NM_008374:188 NM_001134458:188 ENSMUST00000128311.7:231 AK088694:231 ENSMUST00000145401.7:245 ENSMUST00000142396.1:245 M84746:245 BC111909:245
+
|all_trans=MGI:96564
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_008374
 
|nearest_refseq=NM_008374
 
|nearest_unigene=Mm.384
 
|nearest_unigene=Mm.384
|num_trans=10
+
|num_trans=16199
 
|species=mouse
 
|species=mouse
 
|start=32200466
 
|start=32200466
 
|start_of_center_position=32200469
 
|start_of_center_position=32200469
 
|strand=-
 
|strand=-
|transcript_name=ENSMUST00000020518.10 ENSMUST00000131979.1 NM_008374 NM_001134458
+
|transcript_name=ENSMUST00000020518.10 ENSMUST00000131979.1
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=mm_101506.1
 
|tss_id=mm_101506.1

Latest revision as of 11:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_101506.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:32200466
End:32200472
Strand:-
TSS Score:1
Start of the center position in the TSS region:32200469
End of the center position in the TSS region:32200470



Gene and protein annotation


Transcript_name:ENSMUST00000020518.10 ENSMUST00000131979.1
Distance:188
GeneID:16199
HGNC/MGI_ID:MGI:96564
UniProt_ID:A2AVE0 F8WJ69 Q78PA5
Gene_name:interleukin 9 receptor
Gene_symbol:Il9r
Gene_synonyms:
Gene_source:MGI:96564



Transcript annotation


Transcript_name:ENSMUST00000020518.10 ENSMUST00000131979.1
Distance:188
Num_trans:16199
All_trans:MGI:96564



TATA-Box annotation


Distance to TSS:-190
Nearest PromoterID:NM_001134458
Entrez ID:16199
Nearest Unigene:Mm.384
Nearest Refseq:NM_008374
Nearest Ensembl:ENSMUSG00000020279
Gene Name:interleukin 9 receptor
Gene Alias:-
Gene Description:interleukin 9 receptor
Gene Type:protein-coding
CpG%:0.03
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):