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Difference between revisions of "TSS:Mm 101516.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|4930403C08Rik=
 
|4930403C08Rik=
|all_trans=AK161300:-14 AK015057:-14 NM_027031:-24 BC087911:-24 ENSMUST00000054327.2:-29 AK005716:-29
+
|all_trans=MGI:1916556
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 23: Line 23:
 
|nearest_refseq=NM_027031
 
|nearest_refseq=NM_027031
 
|nearest_unigene=Mm.288704
 
|nearest_unigene=Mm.288704
|num_trans=6
+
|num_trans=69306
 
|species=mouse
 
|species=mouse
 
|start=32527541
 
|start=32527541

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101516.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:32527541
End:32527550
Strand:-
TSS Score:1
Start of the center position in the TSS region:32527545
End of the center position in the TSS region:32527546



Gene and protein annotation


Transcript_name:AK161300 AK015057
Distance:-14
GeneID:69306
HGNC/MGI_ID:MGI:1916556
UniProt_ID:
Gene_name:EF-hand calcium binding domain 9
Gene_symbol:Efcab9
Gene_synonyms:1700007I06Rik 4930403C08Rik
Gene_source:MGI:1916556



Transcript annotation


Transcript_name:AK161300 AK015057
Distance:-14
Num_trans:69306
All_trans:MGI:1916556



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_027031
Entrez ID:69306
Nearest Unigene:Mm.288704
Nearest Refseq:NM_027031
Nearest Ensembl:ENSMUSG00000044056
Gene Name:EF-hand calcium binding domain 9
Gene Alias:1700007I06Rik|4930403C08Rik
Gene Description:EF-hand calcium binding domain 9
Gene Type:protein-coding
CpG%:0.015
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):