Difference between revisions of "TSS:Mm 101526.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |FGF-18= |
| + | |all_trans=MGI:1277980 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-418 | |distance_to_tss=-418 | ||
|end=33147828 | |end=33147828 | ||
| + | |end_of_center_position=33147819 | ||
|entrez_id=14172 | |entrez_id=14172 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=D130055P09Rik | + | |gene_alias=D130055P09Rik{{!}}FGF-18 |
|gene_description=fibroblast growth factor 18 | |gene_description=fibroblast growth factor 18 | ||
|gene_id=14172 | |gene_id=14172 | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=MGI:1277980 | |hgnc_mgi_id=MGI:1277980 | ||
|nearest_ensembl=ENSMUSG00000057967 | |nearest_ensembl=ENSMUSG00000057967 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_008005 |
|nearest_refseq=NM_008005 | |nearest_refseq=NM_008005 | ||
|nearest_unigene=Mm.339812 | |nearest_unigene=Mm.339812 | ||
| − | |num_trans= | + | |num_trans=14172 |
|species=mouse | |species=mouse | ||
|start=33147808 | |start=33147808 | ||
| + | |start_of_center_position=33147818 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020507.7 | + | |transcript_name=ENSMUST00000020507.7 AF075291 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101526.1 | |tss_id=mm_101526.1 | ||
Latest revision as of 11:02, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33147818 |
|---|---|
| End of the center position in the TSS region: | 33147819 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000020507.7 AF075291 |
|---|---|
| Distance: | 409 |
| Num_trans: | 14172 |
| All_trans: | MGI:1277980 |
TATA-Box annotation
| Distance to TSS: | -418 |
|---|---|
| Nearest PromoterID: | NM_008005 |
| Entrez ID: | 14172 |
| Nearest Unigene: | Mm.339812 |
| Nearest Refseq: | NM_008005 |
| Nearest Ensembl: | ENSMUSG00000057967 |
| Gene Name: | fibroblast growth factor 18 |
| Gene Alias: | D130055P09Rik|FGF-18 |
| Gene Description: | fibroblast growth factor 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
