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Difference between revisions of "TSS:Mm 101535.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000129179.7:0 ENSMUST00000037522.13:0 AK016583:0 BC033503:0 AK035897:0 AK046865:0 AJ271458:1 BC148412:8 ENSMUST00000102815.9:-80 NM_023146:-80 NR_110973:-80 uc007ikk.3:-80 uc007ikh.2:-80 uc007ikj.2:-80 uc007ikl.2:-80
+
|all_trans=MGI:1929706
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.145
 
|cpg_percent=0.145
 
|distance=0
 
|distance=0
|distance_to_tss=100
+
|distance_to_tss=107
 
|end=33513666
 
|end=33513666
 
|end_of_center_position=33513647
 
|end_of_center_position=33513647
Line 22: Line 22:
 
|nearest_refseq=NM_023146
 
|nearest_refseq=NM_023146
 
|nearest_unigene=Mm.383775
 
|nearest_unigene=Mm.383775
|num_trans=15
+
|num_trans=66011
 
|species=mouse
 
|species=mouse
 
|start=33513626
 
|start=33513626

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101535.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:33513626
End:33513666
Strand:-
TSS Score:1
Start of the center position in the TSS region:33513646
End of the center position in the TSS region:33513647



Gene and protein annotation


Transcript_name:ENSMUST00000129179.7 ENSMUST00000037522.13 AK016583 BC033503 AK035897 AK046865
Distance:0
GeneID:66011
HGNC/MGI_ID:MGI:1929706
UniProt_ID:M0QWL9 Q5SSA5
Gene_name:RAN binding protein 17
Gene_symbol:Ranbp17
Gene_synonyms:4932704E15Rik
Gene_source:MGI:1929706



Transcript annotation


Transcript_name:ENSMUST00000129179.7 ENSMUST00000037522.13 AK016583 BC033503 AK035897 AK046865
Distance:0
Num_trans:66011
All_trans:MGI:1929706



TATA-Box annotation


Distance to TSS:107
Nearest PromoterID:NR_110973
Entrez ID:66011
Nearest Unigene:Mm.383775
Nearest Refseq:NM_023146
Nearest Ensembl:ENSMUSG00000040594
Gene Name:RAN binding protein 17
Gene Alias:-
Gene Description:RAN binding protein 17
Gene Type:protein-coding
CpG%:0.145
GC%:0.791045
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):