Difference between revisions of "TSS:Mm 101537.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000102815.9:-13 NM_023146:-13 NR_110973:-13 uc007ikk.3:-13 uc007ikh.2:-13 uc007ikj.2:-13 uc007ikl.2:-13 AK016583:79 ENSMUST00000129179.7:81 AK0...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1929706 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=-13 | |distance=-13 | ||
| − | |distance_to_tss= | + | |distance_to_tss=25 |
|end=33513733 | |end=33513733 | ||
| + | |end_of_center_position=33513728 | ||
|entrez_id=66011 | |entrez_id=66011 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_023146 | |nearest_refseq=NM_023146 | ||
|nearest_unigene=Mm.383775 | |nearest_unigene=Mm.383775 | ||
| − | |num_trans= | + | |num_trans=66011 |
|species=mouse | |species=mouse | ||
|start=33513722 | |start=33513722 | ||
| + | |start_of_center_position=33513727 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000102815.9 | + | |transcript_name=ENSMUST00000102815.9 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101537.1 | |tss_id=mm_101537.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q99NF8 |
}} | }} | ||
Latest revision as of 11:02, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33513727 |
|---|---|
| End of the center position in the TSS region: | 33513728 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102815.9 |
|---|---|
| Distance: | -13 |
| Num_trans: | 66011 |
| All_trans: | MGI:1929706 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NR_110973 |
| Entrez ID: | 66011 |
| Nearest Unigene: | Mm.383775 |
| Nearest Refseq: | NM_023146 |
| Nearest Ensembl: | ENSMUSG00000040594 |
| Gene Name: | RAN binding protein 17 |
| Gene Alias: | - |
| Gene Description: | RAN binding protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
