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Difference between revisions of "TSS:Mm 101548.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC025550:0 BC027245:-24 BC031196:-35 BC023693:-37 ENSMUST00000020366.7:-61 NM_146017:-61 AK028946:-61 ENSMUST00000135350.1:-63 AK160577:-64
+
|all_trans=MGI:2387597
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_146017
 
|nearest_refseq=NM_146017
 
|nearest_unigene=Mm.99989
 
|nearest_unigene=Mm.99989
|num_trans=9
+
|num_trans=216643
 
|species=mouse
 
|species=mouse
 
|start=33578888
 
|start=33578888

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101548.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:33578888
End:33578896
Strand:-
TSS Score:1
Start of the center position in the TSS region:33578892
End of the center position in the TSS region:33578893



Gene and protein annotation


Transcript_name:BC025550
Distance:0
GeneID:216643
HGNC/MGI_ID:MGI:2387597
UniProt_ID:
Gene_name:gamma-aminobutyric acid (GABA) A receptor, pi
Gene_symbol:Gabrp
Gene_synonyms:
Gene_source:MGI:2387597



Transcript annotation


Transcript_name:BC025550
Distance:0
Num_trans:216643
All_trans:MGI:2387597



TATA-Box annotation


Distance to TSS:65
Nearest PromoterID:NM_146017
Entrez ID:216643
Nearest Unigene:Mm.99989
Nearest Refseq:NM_146017
Nearest Ensembl:ENSMUSG00000020159
Gene Name:gamma-aminobutyric acid (GABA) A receptor, pi
Gene Alias:-
Gene Description:gamma-aminobutyric acid (GABA) A receptor, pi
Gene Type:protein-coding
CpG%:0.02
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):