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Difference between revisions of "TSS:Mm 101550.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK160577:10 ENSMUST00000135350.1:11 ENSMUST00000020366.7:13 NM_146017:13 uc007ikm.1:13 AK028946:13 BC023693:37 BC031196:39 BC027245:50 BC025550:79
+
|all_trans=MGI:2387597
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 10: Line 10:
 
|gc_percent=0.552239
 
|gc_percent=0.552239
 
|gene_alias=-
 
|gene_alias=-
|gene_description="gamma-aminobutyric acid (GABA) A receptor, pi"
+
|gene_description=gamma-aminobutyric acid (GABA) A receptor, pi
 
|gene_id=216643
 
|gene_id=216643
|gene_name="gamma-aminobutyric acid (GABA) A receptor, pi"
+
|gene_name=gamma-aminobutyric acid (GABA) A receptor, pi
 
|gene_source=MGI:2387597
 
|gene_source=MGI:2387597
 
|gene_symbol=Gabrp
 
|gene_symbol=Gabrp
Line 22: Line 22:
 
|nearest_refseq=NM_146017
 
|nearest_refseq=NM_146017
 
|nearest_unigene=Mm.99989
 
|nearest_unigene=Mm.99989
|num_trans=10
+
|num_trans=216643
 
|species=mouse
 
|species=mouse
 
|start=33578969
 
|start=33578969

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101550.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:33578969
End:33578983
Strand:-
TSS Score:1
Start of the center position in the TSS region:33578976
End of the center position in the TSS region:33578977



Gene and protein annotation


Transcript_name:AK160577
Distance:10
GeneID:216643
HGNC/MGI_ID:MGI:2387597
UniProt_ID:
Gene_name:gamma-aminobutyric acid (GABA) A receptor, pi
Gene_symbol:Gabrp
Gene_synonyms:
Gene_source:MGI:2387597



Transcript annotation


Transcript_name:AK160577
Distance:10
Num_trans:216643
All_trans:MGI:2387597



TATA-Box annotation


Distance to TSS:-19
Nearest PromoterID:NM_146017
Entrez ID:216643
Nearest Unigene:Mm.99989
Nearest Refseq:NM_146017
Nearest Ensembl:ENSMUSG00000020159
Gene Name:gamma-aminobutyric acid (GABA) A receptor, pi
Gene Alias:-
Gene Description:gamma-aminobutyric acid (GABA) A receptor, pi
Gene Type:protein-coding
CpG%:0.015
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):