Difference between revisions of "TSS:Mm 101559.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000135034.1:0 AK082267:0 ENSMUST00000154760.1:-143 AK048178:-143 NM_001190886:-184 uc007ikr.2:-184 AK081845:-184 DQ148494:-184 |chr=chr11 |cpg_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Kchip1.2= |
| + | |all_trans=MGI:1917607 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=198 | |distance_to_tss=198 | ||
|end=33993009 | |end=33993009 | ||
| + | |end_of_center_position=33992996 | ||
|entrez_id=70357 | |entrez_id=70357 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=KCHIP1 | + | |gene_alias=KCHIP1{{!}}Kchip1.2 |
|gene_description=Kv channel-interacting protein 1 | |gene_description=Kv channel-interacting protein 1 | ||
|gene_id=70357 | |gene_id=70357 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_027398 | |nearest_refseq=NM_027398 | ||
|nearest_unigene=Mm.252514 | |nearest_unigene=Mm.252514 | ||
| − | |num_trans= | + | |num_trans=70357 |
|species=mouse | |species=mouse | ||
|start=33992981 | |start=33992981 | ||
| + | |start_of_center_position=33992995 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000135034.1 AK082267 | + | |transcript_name=ENSMUST00000238903.1 ENSMUST00000135034.1 AK082267 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101559.1 | |tss_id=mm_101559.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3YAB5 |
}} | }} | ||
Latest revision as of 11:03, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33992995 |
|---|---|
| End of the center position in the TSS region: | 33992996 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000238903.1 ENSMUST00000135034.1 AK082267 |
|---|---|
| Distance: | 0 |
| Num_trans: | 70357 |
| All_trans: | MGI:1917607 |
TATA-Box annotation
| Distance to TSS: | 198 |
|---|---|
| Nearest PromoterID: | NM_001190886 |
| Entrez ID: | 70357 |
| Nearest Unigene: | Mm.252514 |
| Nearest Refseq: | NM_027398 |
| Nearest Ensembl: | ENSMUSG00000053519 |
| Gene Name: | Kv channel-interacting protein 1 |
| Gene Alias: | KCHIP1|Kchip1.2 |
| Gene Description: | Kv channel-interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
