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Difference between revisions of "TSS:Mm 101567.1"

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Line 4: Line 4:
 
|HFH-3=
 
|HFH-3=
 
|Hfh3=
 
|Hfh3=
|all_trans=BC007475:-461 ENSMUST00000060271.2:-496 NM_023907:-496 AK019994:-496
+
|all_trans=MGI:1096329
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 26: Line 26:
 
|nearest_refseq=NM_023907
 
|nearest_refseq=NM_023907
 
|nearest_unigene=Mm.32926
 
|nearest_unigene=Mm.32926
|num_trans=4
+
|num_trans=14233
 
|species=mouse
 
|species=mouse
 
|start=34207586
 
|start=34207586

Latest revision as of 11:03, 26 July 2021

Basic information about the TSS


TSS ID:mm_101567.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:34207586
End:34207593
Strand:-
TSS Score:1
Start of the center position in the TSS region:34207589
End of the center position in the TSS region:34207590



Gene and protein annotation


Transcript_name:BC007475
Distance:-461
GeneID:14233
HGNC/MGI_ID:MGI:1096329
UniProt_ID:
Gene_name:forkhead box I1
Gene_symbol:Foxi1
Gene_synonyms:Fkh10 HFH-3 Hfh3
Gene_source:MGI:1096329



Transcript annotation


Transcript_name:BC007475
Distance:-461
Num_trans:14233
All_trans:MGI:1096329



TATA-Box annotation


Distance to TSS:499
Nearest PromoterID:NM_023907
Entrez ID:14233
Nearest Unigene:Mm.32926
Nearest Refseq:NM_023907
Nearest Ensembl:ENSMUSG00000047861
Gene Name:forkhead box I1
Gene Alias:5830401E05Rik|FREAC6|Fkh10|HFH-3|Hfh3
Gene Description:forkhead box I1
Gene Type:protein-coding
CpG%:0.045
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):