Difference between revisions of "TSS:Mm 101570.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC040427:-324 BC062272:-329 |chr=chr11 |cpg_percent=0.005 |distance=-324 |distance_to_tss=-19278 |end=34227380 |entrez_id=14233 |gc_percent=0.393035 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |FREAC6= |
| + | |Fkh10= | ||
| + | |HFH-3= | ||
| + | |Hfh3= | ||
| + | |all_trans=MGI:2149010 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-19278 | |distance_to_tss=-19278 | ||
|end=34227380 | |end=34227380 | ||
| + | |end_of_center_position=34227367 | ||
|entrez_id=14233 | |entrez_id=14233 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=5830401E05Rik | + | |gene_alias=5830401E05Rik{{!}}FREAC6{{!}}Fkh10{{!}}HFH-3{{!}}Hfh3 |
|gene_description=forkhead box I1 | |gene_description=forkhead box I1 | ||
|gene_id=94176 | |gene_id=94176 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_023907 | |nearest_refseq=NM_023907 | ||
|nearest_unigene=Mm.32926 | |nearest_unigene=Mm.32926 | ||
| − | |num_trans= | + | |num_trans=94176 |
|species=mouse | |species=mouse | ||
|start=34227353 | |start=34227353 | ||
| + | |start_of_center_position=34227366 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=24(GCACTTAAAAGA,-,0.00) |
|transcript_name=BC040427 | |transcript_name=BC040427 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 11:03, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34227366 |
|---|---|
| End of the center position in the TSS region: | 34227367 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC040427 |
|---|---|
| Distance: | -324 |
| Num_trans: | 94176 |
| All_trans: | MGI:2149010 |
TATA-Box annotation
| Distance to TSS: | -19278 |
|---|---|
| Nearest PromoterID: | NM_023907 |
| Entrez ID: | 14233 |
| Nearest Unigene: | Mm.32926 |
| Nearest Refseq: | NM_023907 |
| Nearest Ensembl: | ENSMUSG00000047861 |
| Gene Name: | dedicator of cyto-kinesis 2 |
| Gene Alias: | 5830401E05Rik|FREAC6|Fkh10|HFH-3|Hfh3 |
| Gene Description: | forkhead box I1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 24(GCACTTAAAAGA,-,0.00) |
