Difference between revisions of "TSS:Mm 101603.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|Hch= | |Hch= | ||
|MBC= | |MBC= | ||
| − | |all_trans= | + | |all_trans=MGI:2149010 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_033374 | |nearest_refseq=NM_033374 | ||
|nearest_unigene=Mm.380679 | |nearest_unigene=Mm.380679 | ||
| − | |num_trans= | + | |num_trans=94176 |
|species=mouse | |species=mouse | ||
|start=34783850 | |start=34783850 | ||
| Line 32: | Line 32: | ||
|strand=- | |strand=- | ||
|tata_box=-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) | |tata_box=-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) | ||
| − | |transcript_name=ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 | + | |transcript_name=ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_101603.1 | |tss_id=mm_101603.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=D6RGU3 Q5SRI3 Q8C3J5 | |uniprot_id=D6RGU3 Q5SRI3 Q8C3J5 | ||
}} | }} | ||
Latest revision as of 11:03, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34783875 |
|---|---|
| End of the center position in the TSS region: | 34783876 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 |
|---|---|
| Distance: | 0 |
| Num_trans: | 94176 |
| All_trans: | MGI:2149010 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_033374 |
| Entrez ID: | 94176 |
| Nearest Unigene: | Mm.380679 |
| Nearest Refseq: | NM_033374 |
| Nearest Ensembl: | ENSMUSG00000020143 |
| Gene Name: | dedicator of cyto-kinesis 2 |
| Gene Alias: | AI662014|AW122239|CED-5|Hch|MBC |
| Gene Description: | dedicator of cyto-kinesis 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) |
